Also ignore agent.properties in RAT since
a. they are trivial
b. they are modified by the java code (stripping the license)
QuickCloud: proper path for log.home
QuickCloud: proper path for secstorage.sh
QuickCloud : configuration moved to applicationContext.xml from componentContext.xml
QuickCloud: default to enabled state for devcloud zone
QuickCloud: environment.properties helps customize location of pid file